Faculty of Natural Resources Management and Agriculture

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Browsing Faculty of Natural Resources Management and Agriculture by Author "Goche, Tatenda"

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    Heat Stress Triggers Differential Protein Accumulation in the Extracellular Matrix of Sorghum Cell Suspension Cultures
    (MDPI, 2020-10-22) Ngcala, Mamosa G.; Goche, Tatenda; Brown, Adrian P.; Chivasa, Stephen; Ngara, Rudo
    Plants reprogram gene expression as an adaptive response to survive high temperatures. While the identity and functions of intracellular heat stress-responsive proteins have been extensively studied, the heat response of proteins secreted to the extracellular matrix is unknown. Here, we used Sorghum bicolor, a species adapted for growth in hot climates, to investigate the extracellular heat-induced responses. When exposed to 40 ◦C for 72 h, heat-sensitive Arabidopsis cell suspension cultures died, while ICSB338 sorghum cell cultures survived by activation of a transcriptional response characterized by the induction of HSP70 and HSP90 genes. Quantitative proteomic analysis of proteins recovered from cell culture medium revealed specific heat stress-induced protein accumulation within the sorghum secretome. Of the 265 secreted proteins identified, 31 responded to heat (≥2-fold change), with 84% possessing a predicted signal peptide for targeting to the classical secretory pathway. The differentially accumulated proteins have putative functions in metabolism, detoxification, and protein modifications. A germin (SORBI_3003G427700) was highly heat-inducible at both protein and gene level. Overall, our study reveals new insights into sorghum responses to heat and provides a useful resource of extracellular proteins that could serve as targets for developing thermotolerant crops. Data are available via ProteomeXchange with identifier PXD021536.
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    Sorghum’s Whole-Plant Transcriptome and Proteome Responses to Drought Stress: A Review
    (MDPI, 2021-07-17) Ngara, Rudo; Goche, Tatenda; Swanevelder, Dirk Z. H.; Chivasa, Stephen
    Sorghum is a cereal crop with key agronomic traits of drought and heat stress tolerance, making it an ideal food and industrial commodity for hotter and more arid climates. These stress tolerances also present a useful scientific resource for studying the molecular basis for environmental resilience. Here we provide an extensive review of current transcriptome and proteome works conducted with laboratory, greenhouse, or field-grown sorghum plants exposed to drought, osmotic stress, or treated with the drought stress-regulatory phytohormone, abscisic acid. Large datasets from these studies reveal changes in gene/protein expression across diverse signaling and metabolic pathways. Together, the emerging patterns from these datasets reveal that the overall functional classes of stress-responsive genes/proteins within sorghum are similar to those observed in equivalent studies of other drought-sensitive model species. This highlights a monumental challenge of distinguishing key regulatory genes/proteins, with a primary role in sorghum adaptation to drought, from genes/proteins that change in expression because of stress. Finally, we discuss possible options for taking the research forward. Successful exploitation of sorghum research for implementation in other crops may be critical in establishing climate-resilient agriculture for future food security
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    Worrying cadmium and lead levels in a commonly cultivated vegetable irrigated with river water in Zimbabwe
    (Cogent OA, part of Taylor & Francis Group, 2020-08-10) Tibugari, Handsen; Mafere, Gerald; Dube, Sinikiwe; Chakavarika, Murawu; Mandumbu, Ronald; Musara, Joseph P.; Mapuranga, Rangarirai; Gumbo, Tapiwa; Banda, Annabel; Mathema, Ndabanye; Goche, Tatenda; Zvigumbu, Bernard M.; Mpofu, Nkosentsha
    Vegetable cultivation using river water, which may be polluted with heavy metals, can cause health problems to consumers. A study to establish cadmium and lead levels in water from Msasa, Manyame; Mukuvisi and Nyatsime Rivers was conducted in 2019. A questionnaire survey involving 105 randomly selected urban vegetable growers was conducted to examine farmer knowledge of the potential of polluted water to contaminate produce through heavy metals. Water, soil and vegetable samples were also collected and analysed for heavy metal presence using atomic absorption spectrophotometry. Results showed that some farmers (62%) were aware that wastewater could contain heavy metals. The majority of farmers (67%) applied phosphate-based fertilisers, a potential source of cadmium. Tested at P < 0.05, the results showed that sampled water from the four sites failed to meet the Standards Association of Zimbabwe 5560 (1997) standards. Cadmium tissue concentration from wastewater from Msasa and Manyame rivers was 1.3 and 1.17 mg g−1 respectively, which were 59 and 65 times higher than 0.02 mg g−1 from the control. Water from Manyame and Nyatsime rivers contains levels of heavy metals which exceed the Environmental Management Agency (EMA) safety guidelines. Farmers need to be educated on health hazards from contaminated wastewater. Enforcing regulations on effluent disposal, licencing of vegetable vendors and labelling of vegetables with information on source of water used to irrigate the crop can help reduce exposure of unsuspecting vegetable consumers.